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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8912584_8993119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8912584 - 8993119

Intron Length:

80536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TGTTACAAGAGG

Flanking Amino Acid:

PLFPALVFSSRQGYEELERQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.58

77.4

36.9

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

39.5

-0.9

2.3

49.33

44.2

Associated Gene:

Gene:

LUZP2

Ensembl Gene ID:

ENSAPLG00000004287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004400

8808937 - 8993181

184245

ENSAPLT00000004399

8808550 - 8997421

188872