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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8993581_8997271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8993581 - 8997271

Intron Length:

3691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTTCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

91.9

0.94

0.6

84.9

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

84.7

1.17

0.9

92.55

29.6

Associated Gene:

Gene:

LUZP2

Ensembl Gene ID:

ENSAPLG00000004287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004399

8808550 - 8997421

188872