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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9195947_9196543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9195947 - 9196543

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ACATTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTGTCTTTCACA

Flanking Amino Acid:

VKDVVETPDPEIKRRQLAEA

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

71.9

0.49

0.9

70.6

39.4

Minor 5ss

-2.5

33.4

41.6

Minor BPS

62.1

0.37

1.8

70.38

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043641

9195174 - 9206212

11039

ENSAPLT00000025283

9195174 - 9200676

5503