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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9196595_9198253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9196595 - 9198253

Intron Length:

1659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCCT

5'SS Class:

major

3'SS Sequence:

TATTTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ATAAAAATAACT

Flanking Amino Acid:

AEAAEKRQMEASSRGIKNTY

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

44.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

82.7

0.74

0.8

77.6

30.7

Minor 5ss

38.9

-1.2

3.4

57.5

46.7

Minor BPS

46.3

-0.2

68.26

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043641

9195174 - 9206212

11039

ENSAPLT00000025283

9195174 - 9200676

5503