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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9285468_9302148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

9285468 - 9302148

Intron Length:

16681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATACAT

5'SS Class:

strong_major

3'SS Sequence:

GACAATCCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTCTTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

37.1

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

55.6

0.13

47.6

39.8

Minor 5ss

33.7

-1.9

3.2

47.5

Minor BPS

78.2

0.88

1.1

81.74

33.5

Associated Gene:

Gene:

GAS2

Ensembl Gene ID:

ENSAPLG00000001055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001097

9205831 - 9302292

96462