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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9477792_9478902_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9477792 - 9478902

Intron Length:
1111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTGGT

5'SS Class:
major

3'SS Sequence:
TTCTATTCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAC

U12 Branch Point Sequence:
TTCTATTCAACA

Flanking Amino Acid:
KTNTENFVICRYRDYRYPPD

Intron Amino Acid Position:
861

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.55
1.2
68.2
42.9

Major BPS
81.3
0.78
0.8
83.4
26.1

Major PPT
77.5
0.62
0.9
73.6
35.4

Minor 5ss
29.4
-2.4
3.3
41.3
45.1

Minor BPS
59.9
0.31
1.7
72.44
39.6

Associated Gene:

Gene:
ANO5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9476012 - 9528431
52420

9476012 - 9528431
52420

9476012 - 9528431
52420

9477012 - 9528431
51420

9476012 - 9528431
52420