Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_9491506_9491598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9491506 - 9491598

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

TGTTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTACTGAACT

Flanking Amino Acid:

RLNTTCESSEYSHLFDNVAT

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

82.4

0.73

0.9

76.8

37.3

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

70.4

0.72

1.6

87.42

37.1

Associated Gene:

Gene:

ANO5

Ensembl Gene ID:

ENSAPLG00000008626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009032

9477012 - 9528431

51420

ENSAPLT00000041391

9476012 - 9528431

52420

ENSAPLT00000036747

9476012 - 9528431

52420

ENSAPLT00000021257

9476012 - 9528431

52420

ENSAPLT00000020780

9476012 - 9528431

52420