Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_9503625_9504762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9503625 - 9504762

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAACAG

5'SS Class:

major

3'SS Sequence:

ATATCTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATT

Flanking Amino Acid:

FNLFLKRRLRIDKRHQSKDS

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

55.8

43.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.9

69.4

36.1

Minor 5ss

30.2

-2.3

3.1

30.6

42.7

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

ANO5

Ensembl Gene ID:

ENSAPLG00000008626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009032

9477012 - 9528431

51420

ENSAPLT00000036747

9476012 - 9528431

52420

ENSAPLT00000020780

9476012 - 9528431

52420