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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9606348_9606611_F

Intron Information:

Intron Rank:

146262

Intron Class:

major

Intron Phase:

Intron Coordinates:

9606348 - 9606611

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

TCTTATTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTCCCTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.3

72.4

38.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.83

0.7

84.9

29.5

Minor 5ss

-1

2.6

48.2

41.9

Minor BPS

75.9

0.81

1.3

81.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022086

9606077 - 9690431

84355