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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9721441_9723392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9721441 - 9723392

Intron Length:

1952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGATGG

5'SS Class:

major

3'SS Sequence:

TTTGTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

CAGTGATTGACA

Flanking Amino Acid:

GSPCTTCKCKNGNVCCSVDL

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

63.6

43.6

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

81.5

0.71

0.9

77.1

37.1

Minor 5ss

36.3

-1.6

3.2

47.6

47.8

Minor BPS

46.8

-0.2

2.1

56.05

43.1

Associated Gene:

Gene:

NELL1

Ensembl Gene ID:

ENSAPLG00000008616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008960

9721327 - 10004429

283103

ENSAPLT00000039500

9721390 - 10004429

283040

ENSAPLT00000032625

9721390 - 10004429

283040

ENSAPLT00000047539

9721390 - 10004429

283040

ENSAPLT00000031196

9721390 - 10006029

284640

ENSAPLT00000046758

9721390 - 10004429

283040

ENSAPLT00000029717

9721390 - 10004429

283040

ENSAPLT00000042078

9721327 - 10006029

284703