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Intron Name: Anas_platyrhynchos_platyrhynchos_5_9725336_9730588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9725336 - 9730588

Intron Length:

5253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAG

U12 Branch Point Sequence:

TTGTGGTTGACA

Flanking Amino Acid:

EDRCSVCSCKDGRIFCRRTA

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

27.8

Major BPS

47.5

-0.1

1.6

60.7

45.9

Major PPT

83.1

0.74

0.9

77.1

37.1

Minor 5ss

35.1

-1.7

3.1

48.3

47.4

Minor BPS

49.3

-0

2.5

69.88

42.9

Associated Gene:

Gene:

NELL1

Ensembl Gene ID:

ENSAPLG00000008616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032625

9721390 - 10004429

283040

ENSAPLT00000046758

9721390 - 10004429

283040

ENSAPLT00000031196

9721390 - 10006029

284640

ENSAPLT00000044680

9723279 - 10004429

281151

ENSAPLT00000029717

9721390 - 10004429

283040

ENSAPLT00000042078

9721327 - 10006029

284703

ENSAPLT00000008960

9721327 - 10004429

283103

ENSAPLT00000039500

9721390 - 10004429

283040

ENSAPLT00000047539

9721390 - 10004429

283040