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Intron Name: Anas_platyrhynchos_platyrhynchos_5_99630_103166_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

99630 - 103166

Intron Length:

3537

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTGCTCCC

5'SS Class:

major

3'SS Sequence:

GGGAAAATATGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGGAA

U12 Branch Point Sequence:

AGATGGGAAAAT

Flanking Amino Acid:

DIVLGEIRSRSSRGQGDIPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.3

61.6

41.6

Major BPS

50.5

0.01

1.4

51.7

43.9

Major PPT

40.6

-0.5

1.7

34.3

44.1

Minor 5ss

25.7

-2.8

3.8

37.1

40.1

Minor BPS

31.1

-1.3

2.7

48.81

Associated Gene:

Gene:

PTH

Ensembl Gene ID:

ENSAPLG00000005099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005261

98543 - 103221

4679