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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10017432_10025700_F

Intron Information:

Intron Rank:

142438

Intron Class:

major

Intron Phase:

Intron Coordinates:

10017432 - 10025700

Intron Length:

8269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

TTTCCCTCAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

100

1.12

0.4

100

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

58.7

0.14

69.41

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045543

10016881 - 10025969

9089

ENSAPLT00000026699

9992754 - 10026212

33459