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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10028875_10028985_F

Intron Information:

Intron Rank:

140022

Intron Class:

major

Intron Phase:

Intron Coordinates:

10028875 - 10028985

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GGGGATTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

82.2

0.73

0.8

80.6

31.5

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

37.5

-0.9

1.8

46.75

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019295

10028663 - 10032691

4029