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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10030912_10031222_R

Intron Information:

Intron Rank:

132137

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10030912 - 10031222

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GC-GG

5'SS Sequence:

AGA|GCAATGCCC

5'SS Class:

weak_major

3'SS Sequence:

GCGTGCTGAGCGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAG

U12 Branch Point Sequence:

GGTGCCTGCAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

38.8

Major BPS

44.1

-0.3

1.5

40.4

42.3

Major PPT

34.8

-0.8

3.1

43.1

42.2

Minor 5ss

-3.1

30.9

36.1

Minor BPS

42.9

-0.5

2.2

53.59

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039609

10028663 - 10031320

2658