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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10189860_10190958_F

Intron Information:

Intron Rank:

140555

Intron Class:

major

Intron Phase:

Intron Coordinates:

10189860 - 10190958

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCACATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTGCCTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.2

0.59

0.9

71.7

33.4

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

59.2

0.37

1.8

80.66

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045094

10086416 - 10190990

104575

ENSAPLT00000021506

10189705 - 10191165

1461