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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10247351_10302975_F

Intron Information:

Intron Rank:

144470

Intron Class:

major

Intron Phase:

Intron Coordinates:

10247351 - 10302975

Intron Length:

55625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

GAGAATTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

88.6

0.87

0.6

20.1

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

43.9

-0.3

1.6

54.42

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033062

10245900 - 10303278

57379