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Intron Name: Anas_platyrhynchos_platyrhynchos_6_10682252_10699364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10682252 - 10699364

Intron Length:

17113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTTATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

83.9

0.76

0.7

82.9

25.6

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

57.5

0.22

1.9

71.66

39.8

Associated Gene:

Gene:

NRG3

Ensembl Gene ID:

ENSAPLG00000011354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018069

10681603 - 10801886

120284