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Intron Name: Anas_platyrhynchos_platyrhynchos_6_108748_110489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108748 - 110489

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAC

5'SS Class:

major

3'SS Sequence:

TTGCATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCTTGTCTACCC

Flanking Amino Acid:

PVAASYSAVTRFIEEKSSFE

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

66.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.3

0.73

0.9

76.8

Minor 5ss

30.8

-2.2

3.4

42.1

44.9

Minor BPS

42.6

-0.5

2.2

53.9

44.6

Associated Gene:

Gene:

TUBGCP2

Ensembl Gene ID:

ENSAPLG00000013602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014248

85796 - 118596

32801