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Intron Name: Anas_platyrhynchos_platyrhynchos_6_110698_112075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110698 - 112075

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCCCTTTGAAA

Flanking Amino Acid:

SLSTDTTVPIGTLPLASQES

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.31

1.1

58.9

39.8

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

60.5

0.32

1.4

68.8

37.4

Associated Gene:

Gene:

TUBGCP2

Ensembl Gene ID:

ENSAPLG00000013602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014248

85796 - 118596

32801