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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11169351_11170898_F

Intron Information:

Intron Rank:

140021

Intron Class:

major

Intron Phase:

Intron Coordinates:

11169351 - 11170898

Intron Length:

1548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTGTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

80.8

33.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

42.6

-0.8

57.9

46.3

Minor BPS

54.3

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034714

11162827 - 11171875

9049