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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11184658_11192693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11184658 - 11192693

Intron Length:

8036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

ATCAATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

GGTTACATCACT

Flanking Amino Acid:

LLSLSEDTPVGTHVYTLNGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

0.37

1.3

Major PPT

77.2

0.61

0.9

73.4

40.9

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

48.1

-0

2.2

43.9

Associated Gene:

Gene:

CDHR1

Ensembl Gene ID:

ENSAPLG00000011604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012202

11183893 - 11227649

43757