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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11193748_11195082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11193748 - 11195082

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGTTCTTCATAT

Flanking Amino Acid:

IVSISDGLSTVSEKVRILVT

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.9

0.67

0.9

71.2

39.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

51.6

0.13

1.9

74.44

42.1

Associated Gene:

Gene:

CDHR1

Ensembl Gene ID:

ENSAPLG00000011604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012202

11183893 - 11227649

43757