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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11216101_11218709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11216101 - 11218709

Intron Length:

2609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TAAACCTCAAAA

Flanking Amino Acid:

KYSIYGTGADLFLIHPSTGI

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

70.8

0.52

70.6

31.6

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

54.9

0.15

1.7

64.77

40.4

Associated Gene:

Gene:

CDHR1

Ensembl Gene ID:

ENSAPLG00000011604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012202

11183893 - 11227649

43757