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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11332386_11333826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11332386 - 11333826

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TGTCTGTTACTT

Flanking Amino Acid:

QYFKDVNDQLRFAANLISGV

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

30.6

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

0.68

0.9

73.8

35.8

Minor 5ss

38.3

-1.3

50.5

46.1

Minor BPS

-0.1

2.2

69.3

42.1

Associated Gene:

Gene:

CHAT

Ensembl Gene ID:

ENSAPLG00000012172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012722

11326987 - 11362705

35719