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Intron Name: Anas_platyrhynchos_platyrhynchos_6_1152939_1156836_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1152939 - 1156836

Intron Length:
3898

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTAAGTTTT

5'SS Class:
major

3'SS Sequence:
GTCCTTTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
TGGTCCCCATCT

Flanking Amino Acid:
GTLTPPIIPSVASPTDTSNF

Intron Amino Acid Position:
655

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.1
80.8
34.4

Major BPS
79
0.72
1
69
38.9

Major PPT
77.3
0.61
0.8
71.7
32.9

Minor 5ss
48.1
-0.2
2.8
68.1
42.7

Minor BPS
47.4
-0.1
2.1
70.11
46.1

Associated Gene:

Gene:
PRKG1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

738722 - 1157771
419050