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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11533074_11533514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11533074 - 11533514

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

TATTACAGAAGT

Flanking Amino Acid:

EQQIKENWREVKAKIHSHIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

0.4

1.1

57.8

38.6

Major PPT

76.8

0.6

0.9

68.7

37.3

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

47.1

-0.1

2.1

72.64

43.3

Associated Gene:

Gene:

NCOA4

Ensembl Gene ID:

ENSAPLG00000013221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013772

11527052 - 11534890

7839