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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11533669_11533796_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

11533669 - 11533796

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAGGGTCT

5'SS Class:

weak_major

3'SS Sequence:

GGTCCTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

AAACTATTAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

56.9

42.8

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

70.3

0.46

0.9

66.8

39.3

Minor 5ss

-1.1

3.6

56.7

47.6

Minor BPS

46.7

-0.2

1.8

54.55

37.1

Associated Gene:

Gene:

NCOA4

Ensembl Gene ID:

ENSAPLG00000013221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013772

11527052 - 11534890

7839