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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11574177_11575533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11574177 - 11575533

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTGATTGAAAT

Flanking Amino Acid:

LSAHLDEKRSGVIQVKAHII

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

78.9

0.65

0.8

73.9

36.8

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

0.11

1.8

75.14

41.3

Associated Gene:

Gene:

SHLD2

Ensembl Gene ID:

ENSAPLG00000013430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013993

11571079 - 11585139

14061