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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11605494_11615104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11605494 - 11615104

Intron Length:

9611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATCT

Flanking Amino Acid:

HSQHRTPCKGGIRYSLDVSV

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

65.9

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.2

0.57

0.9

70.1

36.5

Minor 5ss

26.9

-2.7

2.9

33.5

41.8

Minor BPS

68.3

0.65

1.5

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014092

11605042 - 11630882

25841