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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11615186_11616025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11615186 - 11616025

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCATTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTCCTTTGCATT

Flanking Amino Acid:

SLMTYKCAVVDVPFGGAKAG

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.1

0.56

0.9

69.6

36.6

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

45.9

-0.2

1.8

65.05

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014092

11605042 - 11630882

25841