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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11618315_11622708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11618315 - 11622708

Intron Length:

4394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ACTCCCATAACT

Flanking Amino Acid:

DTYASTIGHYDINAHACVTG

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

0.85

0.9

39.9

Major PPT

80.9

0.7

0.8

74.5

33.8

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

66.9

0.61

1.6

81.27

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014092

11605042 - 11630882

25841