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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11663090_11667188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11663090 - 11667188

Intron Length:

4099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAC

U12 Branch Point Sequence:

TTTCCTTTCACA

Flanking Amino Acid:

EKTKEGVMYVGTKTKEGVVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

52.3

0.06

1.1

61.1

34.5

Major PPT

87.6

0.85

0.7

83.3

25.1

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

68.2

0.57

1.7

80.59

35.2

Associated Gene:

Gene:

SNCG

Ensembl Gene ID:

ENSAPLG00000013906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014485

11658792 - 11667309

8518