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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11687925_11689178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11687925 - 11689178

Intron Length:

1254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

AATGTTTTCACA

Flanking Amino Acid:

GFTGKDCEQRDPNFIPVPGN

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

71.5

0.48

63.9

41.1

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

49.4

-0

1.8

61.79

38.8

Associated Gene:

Gene:

MMRN2

Ensembl Gene ID:

ENSAPLG00000013958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036417

11660100 - 11695852

35753

ENSAPLT00000014538

11660100 - 11695852

35753