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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11689245_11691817_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11689245 - 11691817

Intron Length:

2573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTATGTTCT

5'SS Class:

weak_major

3'SS Sequence:

TCTGTGTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTAATTAATT

Flanking Amino Acid:

EGWEEEFSNHNLQERLLQQV

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

69.6

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.54

40.8

Minor 5ss

52.8

0.1

2.3

69.4

35.8

Minor BPS

66.3

0.59

1.7

34.8

Associated Gene:

Gene:

MMRN2

Ensembl Gene ID:

ENSAPLG00000013958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036417

11660100 - 11695852

35753