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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11707692_11708523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11707692 - 11708523

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCACGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AATTCACTAACT

Flanking Amino Acid:

ADLGLAVKFNSDTNEVDVPL

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.6

0.55

0.9

69.9

35.2

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

61.5

0.44

1.9

82.38

37.8

Associated Gene:

Gene:

BMPR1A

Ensembl Gene ID:

ENSAPLG00000013998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014621

11704287 - 11745098

40812

ENSAPLT00000047009

11705432 - 11782195

76764