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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11709407_11710121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11709407 - 11710121

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CTCCCTGCCACT

Flanking Amino Acid:

SGSGSGLPLLVQRTIAKQIQ

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

79.1

30.1

Major BPS

-0.2

1.4

53.5

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

41.4

-1

54.6

Minor BPS

39.1

-0.7

2.4

56.65

46.2

Associated Gene:

Gene:

BMPR1A

Ensembl Gene ID:

ENSAPLG00000013998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047009

11705432 - 11782195

76764

ENSAPLT00000014621

11704287 - 11745098

40812