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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11713631_11715546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11713631 - 11715546

Intron Length:

1916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATCTGTTTATTC

Flanking Amino Acid:

CPDDAINNTCITNGHCFAIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.8

0.71

0.9

73.8

40.5

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

48.3

-0.1

59.67

40.6

Associated Gene:

Gene:

BMPR1A

Ensembl Gene ID:

ENSAPLG00000013998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047009

11705432 - 11782195

76764

ENSAPLT00000014621

11704287 - 11745098

40812