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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11724800_11744971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11724800 - 11744971

Intron Length:

20172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTTGCTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

80.2

0.68

0.9

76.9

37.3

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

69.9

0.71

2.1

92.33

36.7

Associated Gene:

Gene:

BMPR1A

Ensembl Gene ID:

ENSAPLG00000013998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047009

11705432 - 11782195

76764

ENSAPLT00000014621

11704287 - 11745098

40812