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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11810494_11819694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11810494 - 11819694

Intron Length:

9201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCTT

5'SS Class:

major

3'SS Sequence:

ATTTTGCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CATACCTTCATT

Flanking Amino Acid:

VQESFSSSFQRNTTQSYTPM

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.2

73.4

43.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.7

0.69

0.8

78.4

35.6

Minor 5ss

42.2

-0.9

3.5

64.9

46.4

Minor BPS

58.6

0.35

1.8

73.67

43.4

Associated Gene:

Gene:

LDB3

Ensembl Gene ID:

ENSAPLG00000014462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027157

11796356 - 11907192

110837