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Intron Name: Anas_platyrhynchos_platyrhynchos_6_11954591_11959026_F

Intron Information:

Intron Rank:

140269

Intron Class:

major

Intron Phase:

Intron Coordinates:

11954591 - 11959026

Intron Length:

4436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.9

33.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.4

0.53

1.1

37.3

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

70.1

0.49

1.2

73.17

33.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017470

11954311 - 11960106

5796