Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_12027975_12029015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12027975 - 12029015

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGGAA

5'SS Class:

major

3'SS Sequence:

TTTAATTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LLGCLCQESPINVTTVREYL

Intron Amino Acid Position:

1181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.3

36.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.7

0.65

0.8

77.5

36.4

Minor 5ss

30.7

-2.2

3.6

42.8

45.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

WAPL

Ensembl Gene ID:

ENSAPLG00000014722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039715

11961107 - 12029264

68158

ENSAPLT00000034107

11962683 - 12029582

66900

ENSAPLT00000032718

11962683 - 12029264

66582

ENSAPLT00000015382

11962683 - 12029582

66900

ENSAPLT00000044936

11962683 - 12029264

66582