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Intron Name: Anas_platyrhynchos_platyrhynchos_6_123233_124173_F


Intron Information:

Intron Rank:
3

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
123233 - 124173

Intron Length:
941

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGCT

5'SS Class:
strong_major

3'SS Sequence:
CAATGGATGTCAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
AATGGAT

U12 Branch Point Sequence:
AGTGTGCCAATG

Flanking Amino Acid:
FRFGRPKKVKSMETSEQFQV

Intron Amino Acid Position:
114

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
1.1
78.8
35.5

Major BPS
54.8
0.12
1.4
55.1
42.1

Major PPT
54.8
0.11
1.2
51.1
46.5

Minor 5ss
40.9
-1
3.2
59.5
45

Minor BPS
35.1
-1.2
2.2
38.74
38.7

Associated Gene:

Gene:
ZNF511

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

119353 - 124444
5092