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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12459886_12566515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12459886 - 12566515

Intron Length:

106630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

PRGAQTFINEAVETNLASKD

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

29.6

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

GRID1

Ensembl Gene ID:

ENSAPLG00000014832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030396

12284526 - 12689469

404944

ENSAPLT00000026998

12385126 - 12689469

304344