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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12459886_12580212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12459886 - 12580212

Intron Length:

120327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAA

Flanking Amino Acid:

PRGAQTFINEEITDNEILEL

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.2

0.63

0.8

72.1

31.3

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

66.6

0.52

1.3

71.49

33.9

Associated Gene:

Gene:

GRID1

Ensembl Gene ID:

ENSAPLG00000014832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015486

12385126 - 12689205

304080