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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12592756_12635898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12592756 - 12635898

Intron Length:

43143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAC

U12 Branch Point Sequence:

CTTACTGTACTT

Flanking Amino Acid:

SETFGKDVRRLATWDSEKGL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

78.7

37.2

Major BPS

64.2

0.35

60.7

37.6

Major PPT

80.3

0.68

0.8

73.1

37.3

Minor 5ss

35.4

-1.7

3.2

40.3

45.6

Minor BPS

-0.2

2.2

67.54

44.3

Associated Gene:

Gene:

GRID1

Ensembl Gene ID:

ENSAPLG00000014832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026998

12385126 - 12689469

304344

ENSAPLT00000015486

12385126 - 12689205

304080

ENSAPLT00000030396

12284526 - 12689469

404944