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Intron Name: Anas_platyrhynchos_platyrhynchos_6_1267577_1269909_R

Intron Information:

Intron Rank:

153504

Intron Class:

major

Intron Phase:

Intron Coordinates:

1267577 - 1269909

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

CAAGTGTTATGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

72.6

0.51

0.9

68.7

37.2

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

34.3

-1.3

2.2

31.85

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028564

1263416 - 1270428

7013