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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12784117_12787609_F

Intron Information:

Intron Rank:

140252

Intron Class:

major

Intron Phase:

Intron Coordinates:

12784117 - 12787609

Intron Length:

3493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCTGT

5'SS Class:

major

3'SS Sequence:

TGTCTTTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTGTCTTTCAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

70.9

41.9

Major BPS

67.7

0.44

38.9

Major PPT

77.7

0.62

0.9

74.4

35.1

Minor 5ss

41.9

-0.9

2.9

57.2

46.9

Minor BPS

49.5

-0

62.28

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042125

12782245 - 12787675

5431