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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12786438_12802373_R

Intron Information:

Intron Rank:

136242

Intron Class:

major

Intron Phase:

Intron Coordinates:

12786438 - 12802373

Intron Length:

15936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TAACTAATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATCTCCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

66.3

0.37

58.8

40.4

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

84.6

1.16

90.25

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042128

12786309 - 12826804

40496