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Intron Name: Anas_platyrhynchos_platyrhynchos_6_12788438_12802373_R

Intron Information:

Intron Rank:

136240

Intron Class:

major

Intron Phase:

Intron Coordinates:

12788438 - 12802373

Intron Length:

13936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TGTAGCTCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

67.6

0.44

1.2

Major PPT

82.1

0.72

0.8

76.1

32.5

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

44.7

-0.3

2.2

65.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039718

12788331 - 12809144

20814